Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
TBX10T-box transcription factor 10. (184 aa)    
Predicted Functional Partners:
ENSPNAP00000031092
Ripply transcriptional repressor 3.
    
 
 0.799
LOC108439409
Prickle homolog 1b.
      
 0.741
LOC108412058
Prickle homolog 2a.
      
 0.739
prickle2
Prickle homolog 2b.
      
 0.738
prickle1
Prickle homolog 1a.
      
 0.721
vangl2
Vang-like protein.
      
 0.717
gnb1l
Guanine nucleotide binding protein (G protein), beta polypeptide 1-like.
      
 0.658
LOC108430942
NK2 homeobox 5.
    
 0.630
LOC108435380
Islet1, like.
    
 0.611
isl1
ISL LIM homeobox 1.
    
 0.611
Your Current Organism:
Pygocentrus nattereri
NCBI taxonomy Id: 42514
Other names: P. nattereri, Serrasalmus nattereri, red piranha, red-bellied piranha
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