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The next version of STRING is ready for use in your analyses: updated networks across STRING • newly available directed regulatory networks • a new typed view showing functional, physical, and regulatory edges in one network • new clustering options and cluster-based layouts • … and much more!
Explore STRING v12.5 →
STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TBX10T-box transcription factor 10. (184 aa)    
Predicted Functional Partners:
ENSPNAP00000021022
Uncharacterized protein.
   
  
 0.695
rchy1
Ring finger and CHY zinc finger domain containing 1.
   
    0.681
LOC108439409
Prickle homolog 1b.
      
 0.549
prickle2
Prickle homolog 2b.
      
 0.547
LOC108412058
Prickle homolog 2a.
      
 0.547
prickle1
Prickle homolog 1a.
      
 0.530
vangl2
Vang-like protein.
      
 0.513
LOC108434765
H6 family homeobox 4.
    
 
 0.507
HMX3
H6 family homeobox 3.
    
 
 0.507
LOC108414518
H6 family homeobox 3a.
    
 
 0.507
Your Current Organism:
Pygocentrus nattereri
NCBI taxonomy Id: 42514
Other names: P. nattereri, Serrasalmus nattereri, red piranha, red-bellied piranha
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.