Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LOC108442046Neuronal PAS domain protein 2. (820 aa)    
Predicted Functional Partners:
bhlhe41
Basic helix-loop-helix family, member e41.
    
 0.980
nr1d1
Nuclear receptor subfamily 1, group d, member 1.
    
 0.973
LOC108428117
Cryptochrome circadian regulator 2.
    
 0.967
bhlhe40
Basic helix-loop-helix family, member e40.
    
 0.945
ENSPNAP00000020206
Si:ch1073-390k14.1.
    
 0.937
LOC108439331
Aryl hydrocarbon receptor nuclear translocator-like 1a.
   
 0.929
arntl
Aryl hydrocarbon receptor nuclear translocator-like 1b.
   
 0.929
arntl2
Aryl hydrocarbon receptor nuclear translocator-like 2.
   
 0.929
LOC108435770
CLOCK-interacting pacemaker a.
    
 0.928
dbp
D site albumin promoter binding protein b.
    
 0.920
Your Current Organism:
Pygocentrus nattereri
NCBI taxonomy Id: 42514
Other names: P. nattereri, Serrasalmus nattereri, red piranha, red-bellied piranha
Server load: low (10%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.