Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
LOC108411348Praja ring finger ubiquitin ligase 2. (644 aa)    
Predicted Functional Partners:
LOC108439533
MOB kinase activator 1Bb.
    
 
 0.847
LOC108438484
MOB kinase activator 1A.
    
 
 0.847
faf2
Fas associated factor family member 2.
    
 
 0.819
ubxn1
UBX domain protein 1.
   
 
 0.800
faf1
Fas (TNFRSF6) associated factor 1.
    
 
 0.781
ubxn7
UBX domain protein 7.
    
   0.774
crebrf
Creb3 regulatory factor.
   
 
 0.714
lgr4
Leucine-rich repeat containing G protein-coupled receptor 4.
    
 0.706
rspo2
R-spondin 2.
    
 0.697
uba52
Ubiquitin A-52 residue ribosomal protein fusion product 1.
    
 0.679
Your Current Organism:
Pygocentrus nattereri
NCBI taxonomy Id: 42514
Other names: P. nattereri, Serrasalmus nattereri, red piranha, red-bellied piranha
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