Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSPNAP00000001477Syntrophin, gamma 2. (452 aa)    
Predicted Functional Partners:
sgcd
Sarcoglycan, delta (dystrophin-associated glycoprotein).
   
 
 0.923
dtna
Dystrobrevin.
    
 0.910
LOC108412184
Dystrobrevin.
    
 0.910
LOC108425647
Dystrobrevin.
    
 0.910
sgcg
Sarcoglycan, gamma.
   
 
 0.892
sntb2
Syntrophin, beta 2.
    
0.853
sntb1
Syntrophin, basic 1.
    
0.853
SNTA1
Syntrophin alpha 1.
    
0.853
DMD
Dystrophin; May play a role in anchoring the cytoskeleton to the plasma membrane.
    
 0.847
LOC108444285
Sarcoglycan, alpha.
   
 
 0.846
Your Current Organism:
Pygocentrus nattereri
NCBI taxonomy Id: 42514
Other names: P. nattereri, Serrasalmus nattereri, red piranha, red-bellied piranha
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