Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
LOC108414547Si:dkey-52j6.3. (329 aa)    
Predicted Functional Partners:
LOC108412904
Uncharacterized protein.
    
  0.644
ntng1
Netrin g1a.
    
  0.478
ENSPNAP00000014753
Vav 3 guanine nucleotide exchange factor b.
    
  0.478
eef1g
Eukaryotic translation elongation factor 1 gamma.
    
 0.476
lrrc20
Leucine rich repeat containing 20.
      
 0.457
LOC108436702
Ankyrin repeat and SOCS box-containing 12b.
    
 0.457
asb8
Ankyrin repeat and SOCS box containing 8.
    
 0.426
lrrc14b
Leucine rich repeat containing 14B.
      
 0.420
tceanc2
Transcription elongation factor A (SII) N-terminal and central domain containing 2.
      
 0.414
wdr90
WD repeat domain 90.
    
   0.409
Your Current Organism:
Pygocentrus nattereri
NCBI taxonomy Id: 42514
Other names: P. nattereri, Serrasalmus nattereri, red piranha, red-bellied piranha
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