Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
axlUncharacterized protein. (834 aa)    
Predicted Functional Partners:
gas6
Uncharacterized protein.
    
 0.972
pros1
Protein S.
    
 0.965
LOC108425788
Engulfment and cell motility 1 (ced-12 homolog, C. elegans).
     
 0.917
SHC3
SHC adaptor protein 3.
    
 0.891
shc1
SHC (Src homology 2 domain containing) transforming protein 1.
    
 0.891
LOC108424939
Si:ch1073-396h14.1.
    
 0.869
gab1
GRB2-associated binding protein 1.
    
 0.869
adam17
ADAM metallopeptidase domain 17a.
    
 0.860
LOC108410928
ADAM metallopeptidase domain 17b.
    
 0.860
elmo2
Engulfment and cell motility 2.
     
 0.858
Your Current Organism:
Pygocentrus nattereri
NCBI taxonomy Id: 42514
Other names: P. nattereri, Serrasalmus nattereri, red piranha, red-bellied piranha
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