Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
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Co-occurrence
Co-expression
Experiments
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[Homology]
Score
mmachcMetabolism of cobalamin associated C. (259 aa)    
Predicted Functional Partners:
LOC108411584
Zgc:92335.
    
 0.982
mmadhc
Metabolism of cobalamin associated D.
    
 0.982
mtr
Methionine synthase; Catalyzes the transfer of a methyl group from methyl- cobalamin to homocysteine, yielding enzyme-bound cob(I)alamin and methionine. Subsequently, remethylates the cofactor using methyltetrahydrofolate.
   
 0.927
LOC108424184
Malate synthase-like.
   
 0.862
mtrr
5-methyltetrahydrofolate-homocysteine methyltransferase reductase.
     
 0.858
lmbrd1
LMBR1 domain containing 1.
      
 0.801
mmaa
Metabolism of cobalamin associated A.
      
 0.798
dgke
Diacylglycerol kinase.
      
 0.779
mmab
Corrinoid adenosyltransferase; Belongs to the Cob(I)alamin adenosyltransferase family.
     
 0.779
LOC108440334
Uncharacterized protein.
    
 
 0.770
Your Current Organism:
Pygocentrus nattereri
NCBI taxonomy Id: 42514
Other names: P. nattereri, Serrasalmus nattereri, red piranha, red-bellied piranha
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