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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ccdc189Si:ch73-81k8.2. (249 aa)    
Predicted Functional Partners:
lrguk
Leucine-rich repeats and guanylate kinase domain containing.
    
 
 0.867
dpy30
Dpy-30 histone methyltransferase complex regulatory subunit.
    
 
 0.861
spag17
Uncharacterized protein.
    
 
 0.779
mycbp
MYC binding protein.
    
 
 0.755
cfap221
Si:ch73-222h13.1.
    
 
 0.700
cfap74
Calcium channel, voltage-dependent, L type, alpha 1D subunit, b.
    
 
 0.699
polr3c
RNA polymerase III subunit C3; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
    
   0.694
cfap69
Uncharacterized protein.
    
   0.694
armc3
Armadillo repeat containing 3.
      
 0.632
kiaa1257
Si:dkey-57n24.6.
    
 
 0.594
Your Current Organism:
Pygocentrus nattereri
NCBI taxonomy Id: 42514
Other names: P. nattereri, Serrasalmus nattereri, red piranha, red-bellied piranha
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