Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
LOC108411340Crystallin, beta B3; Belongs to the beta/gamma-crystallin family. (238 aa)    
Predicted Functional Partners:
tsc2
TSC complex subunit 2.
    
 0.981
mtor
Serine/threonine-protein kinase TOR; Belongs to the PI3/PI4-kinase family.
    
 0.970
rptor
Regulatory associated protein of MTOR, complex 1.
    
 0.960
akt1s1
AKT1 substrate 1 (proline-rich).
    
 0.940
bnip3
BCL2 interacting protein 3.
    
 0.939
tsc1
TSC complex subunit 1a.
   
 0.928
LOC108438099
TSC complex subunit 1b.
   
 0.928
mlst8
MTOR associated protein, LST8 homolog (S. cerevisiae).
    
 0.924
LOC108443239
TBC1 domain family, member 7.
     
 0.896
tpt1
Tumor protein, translationally-controlled 1; Belongs to the TCTP family.
   
 
 0.833
Your Current Organism:
Pygocentrus nattereri
NCBI taxonomy Id: 42514
Other names: P. nattereri, Serrasalmus nattereri, red piranha, red-bellied piranha
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