Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Co-occurrence
Co-expression
Experiments
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[Homology]
Score
LOC108432077DEAD (Asp-Glu-Ala-Asp) box helicase 5; Belongs to the DEAD box helicase family. (623 aa)    
Predicted Functional Partners:
drosha
Drosha ribonuclease III.
  
 0.986
dhx9
DEAH (Asp-Glu-Ala-His) box helicase 9.
  
 0.973
pes1
Pescadillo homolog; Component of the PeBoW complex, which is required for maturation of 28S and 5.8S ribosomal RNAs and formation of the 60S ribosome.
   
 0.954
sf1
Splicing factor 1.
   
 0.923
dhx15
DEAH (Asp-Glu-Ala-His) box helicase 15.
  
 0.916
alyref
Aly/REF export factor.
   
 0.910
DDX5
DEAD-box helicase 5; Belongs to the DEAD box helicase family.
     
  0.903
dkc1
Dyskeratosis congenita 1, dyskerin.
  
 
 0.900
rbm34
RNA binding motif protein 34.
   
 0.895
wdr12
Ribosome biogenesis protein WDR12; Component of the PeBoW complex, which is required for maturation of 28S and 5.8S ribosomal RNAs and formation of the 60S ribosome.
   
 0.887
Your Current Organism:
Pygocentrus nattereri
NCBI taxonomy Id: 42514
Other names: P. nattereri, Serrasalmus nattereri, red piranha, red-bellied piranha
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