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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
casc4Cancer susceptibility candidate 4. (489 aa)    
Predicted Functional Partners:
LOC108412904
Uncharacterized protein.
    
  0.617
casc3
Casc3 exon junction complex subunit.
      
 0.599
ENSPNAP00000013006
Kinesin family member 18A; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.
  
 
   0.523
spryd3
SPRY domain containing 3.
      
 0.520
LOC108432509
Uncharacterized protein.
    
  0.519
LOC108414528
Uncharacterized protein.
    
  0.519
LOC108444442
ACD shelterin complex subunit and telomerase recruitment factor.
  
 
  0.518
tbc1d25
TBC1 domain family, member 25.
      
 0.513
gtpbp10
GTP-binding protein 10 (putative).
      
 0.503
znf503
Zinc finger protein 503.
      
 0.493
Your Current Organism:
Pygocentrus nattereri
NCBI taxonomy Id: 42514
Other names: P. nattereri, Serrasalmus nattereri, red piranha, red-bellied piranha
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.