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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
fam102bFamily with sequence similarity 102 member Bb. (368 aa)    
Predicted Functional Partners:
pi4kb
Phosphatidylinositol 4-kinase, catalytic, beta; Belongs to the PI3/PI4-kinase family.
   
 0.759
synj1
Synaptojanin 1.
    
 0.737
sec61g
SEC61 translocon gamma subunit.
   
 0.726
inpp5e
Inositol polyphosphate-5-phosphatase E.
     
 0.705
ENSPNAP00000001319
SH2 domain-containing protein.
     
 0.700
inppl1
Inositol polyphosphate phosphatase-like 1a.
     
 0.700
LOC108432886
Inositol polyphosphate phosphatase-like 1b.
     
 0.700
LOC108435558
G protein signaling modulator 2, like.
    
 
 0.601
LOC108442938
Uncharacterized protein.
    
 
 0.601
pin1
Peptidyl-prolyl cis-trans isomerase.
     
 0.594
Your Current Organism:
Pygocentrus nattereri
NCBI taxonomy Id: 42514
Other names: P. nattereri, Serrasalmus nattereri, red piranha, red-bellied piranha
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