Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LOC108442620Oxysterol-binding protein; Belongs to the OSBP family. (799 aa)    
Predicted Functional Partners:
gak
Cyclin G associated kinase.
   
 
 0.727
LOC108427204
VAMP (vesicle-associated membrane protein)-associated protein A, like.
    
 
 0.637
VAPA
VAMP associated protein A.
    
 
 0.637
vapb
VAMP (vesicle-associated membrane protein)-associated protein B and C.
    
 
 0.637
dnajc6
DnaJ (Hsp40) homolog, subfamily C, member 6.
    
 
 0.599
ENSPNAP00000015378
Uncharacterized protein.
    
 
 0.491
mospd1
Motile sperm domain containing 1.
    
 
 0.491
nprl3
NPR3-like, GATOR1 complex subunit.
   
 
 0.401
Your Current Organism:
Pygocentrus nattereri
NCBI taxonomy Id: 42514
Other names: P. nattereri, Serrasalmus nattereri, red piranha, red-bellied piranha
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