Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ilf3Interleukin enhancer binding factor 3b. (853 aa)    
Predicted Functional Partners:
ilf2
Interleukin enhancer binding factor 2.
   
 0.999
dhx9
DEAH (Asp-Glu-Ala-His) box helicase 9.
   
 
 0.991
LOC108442672
Eukaryotic translation initiation factor 2-alpha kinase 2.
    
 0.980
LOC108412072
Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.
    
 0.980
strbp
Spermatid perinuclear RNA binding protein.
   
   0.977
LOC108423616
Uncharacterized protein.
   
   0.977
xpo5
Exportin 5.
    
 
 0.968
sf3b4
Splicing factor 3b, subunit 4.
   
 
 0.961
LOC108443858
Heterogeneous nuclear ribonucleoprotein K, like.
   
 
 0.949
hnrnpk
Heterogeneous nuclear ribonucleoprotein K.
   
 
 0.949
Your Current Organism:
Pygocentrus nattereri
NCBI taxonomy Id: 42514
Other names: P. nattereri, Serrasalmus nattereri, red piranha, red-bellied piranha
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