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The next version of STRING is ready for use in your analyses: updated networks across STRING • newly available directed regulatory networks • a new typed view showing functional, physical, and regulatory edges in one network • new clustering options and cluster-based layouts • … and much more!
Explore STRING v12.5 →
STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
cdc42ep3CDC42 effector protein (Rho GTPase binding) 3. (277 aa)    
Predicted Functional Partners:
rhoq
Ras homolog family member Q.
    
 0.720
ENSPNAP00000020717
Ras homolog family member H.
    
 0.720
rhoj
Ras homolog family member J.
    
 0.720
skp1
S-phase kinase-associated protein 1; Belongs to the SKP1 family.
      
 0.667
mapkapk5
MAPK activated protein kinase 5.
   
 
  0.611
LOC108429432
Si:ch73-362m14.4.
      
 0.556
diaph2
Diaphanous-related formin 2.
     
 0.525
ENSPNAP00000020008
Uncharacterized protein.
     
 0.525
DIAPH1
Diaphanous related formin 1.
     
 0.525
LOC108428456
Diaphanous-related formin 3.
     
 0.525
Your Current Organism:
Pygocentrus nattereri
NCBI taxonomy Id: 42514
Other names: P. nattereri, Serrasalmus nattereri, red piranha, red-bellied piranha
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