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The next version of STRING is ready for use in your analyses: updated networks across STRING • newly available directed regulatory networks • a new typed view showing functional, physical, and regulatory edges in one network • new clustering options and cluster-based layouts • … and much more!
Explore STRING v12.5 →
STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ankrd44Ankyrin repeat domain 44. (980 aa)    
Predicted Functional Partners:
ppp6c
Serine/threonine-protein phosphatase.
    
 0.818
ppp6r2
Protein phosphatase 6, regulatory subunit 2b.
    
 0.706
LOC108432542
Protein phosphatase 6, regulatory subunit 2a.
    
 0.706
ppp6r3
Protein phosphatase 6, regulatory subunit 3.
    
 0.706
ift81
Intraflagellar transport 81 homolog.
    
 0.611
ift22
Intraflagellar transport 22 homolog (Chlamydomonas).
    
 0.571
commd4
COMM domain containing 4.
    
 0.566
rps3
Ribosomal protein S3; Belongs to the universal ribosomal protein uS3 family.
    
 0.560
ikbkb
Inhibitor of nuclear factor kappa B kinase subunit beta.
    
 0.543
chuk
Component of inhibitor of nuclear factor kappa B kinase complex.
    
 0.543
Your Current Organism:
Pygocentrus nattereri
NCBI taxonomy Id: 42514
Other names: P. nattereri, Serrasalmus nattereri, red piranha, red-bellied piranha
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.