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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
gcdhGlutaryl-CoA dehydrogenase b. (442 aa)    
Predicted Functional Partners:
echs1
Enoyl CoA hydratase, short chain, 1, mitochondrial; Belongs to the enoyl-CoA hydratase/isomerase family.
  
 0.965
eci2
Enoyl-CoA delta isomerase 2.
  
 0.963
ehhadh
Enoyl-CoA, hydratase/3-hydroxyacyl CoA dehydrogenase.
  
 0.952
LOC108426563
Zgc:101569; Belongs to the enoyl-CoA hydratase/isomerase family.
  
 0.947
hadha
Hydroxyacyl-CoA dehydrogenase trifunctional multienzyme complex subunit alpha a; Belongs to the enoyl-CoA hydratase/isomerase family.
  
 0.945
LOC108425650
Hydroxyacyl-CoA dehydrogenase trifunctional multienzyme complex subunit alpha b; Belongs to the enoyl-CoA hydratase/isomerase family.
  
 0.945
scp2
Sterol carrier protein 2a; Belongs to the thiolase-like superfamily. Thiolase family.
  
 0.933
LOC108440020
Sterol carrier protein 2b.
  
 0.933
etfb
Electron transfer flavoprotein subunit beta.
  
 0.932
dlst
Dihydrolipoamide S-succinyltransferase.
  
 0.930
Your Current Organism:
Pygocentrus nattereri
NCBI taxonomy Id: 42514
Other names: P. nattereri, Serrasalmus nattereri, red piranha, red-bellied piranha
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