Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
pmelPremelanosome protein a. (733 aa)    
Predicted Functional Partners:
MLANA
Melan-A.
   
  
 0.907
TYR
Tyrosinase.
   
  
 0.854
LOC108442522
Ig-like domain-containing protein.
    
   0.801
LOC108424034
Melanocyte inducing transcription factor a.
    
 0.774
LOC108440327
Transcription factor binding to IGHM enhancer 3b.
    
 0.773
LOC108438070
Melanocyte inducing transcription factor b.
    
 0.773
LOC108440537
Transcription factor binding to IGHM enhancer 3a.
    
 0.773
LOC108434352
Tyrosinase-related protein 1b.
   
  
 0.741
tyrp1
Tyrosinase related protein 1.
   
  
 0.741
dct
Dopachrome tautomerase.
   
  
 0.729
Your Current Organism:
Pygocentrus nattereri
NCBI taxonomy Id: 42514
Other names: P. nattereri, Serrasalmus nattereri, red piranha, red-bellied piranha
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