Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LOC108428665MAX dimerization protein MGA a. (2876 aa)    
Predicted Functional Partners:
LOC108410973
Si:ch211-195d17.2.
    
 0.963
max
Myc associated factor X.
    
 0.948
MAX
MYC associated factor X.
    
 0.948
LOC108430745
Mbt domain containing 1.
   
 0.901
LOC108413511
L3MBTL histone methyl-lysine binding protein 2.
   
 0.901
mbtd1
FCS-type domain-containing protein.
   
 0.901
pcgf6
Polycomb group ring finger 6.
    
 0.894
pcgf1
Polycomb group ring finger 1.
    
 0.894
RING1
Ring finger protein 1.
    
 0.856
rnf2
Ring finger protein 2.
    
 0.856
Your Current Organism:
Pygocentrus nattereri
NCBI taxonomy Id: 42514
Other names: P. nattereri, Serrasalmus nattereri, red piranha, red-bellied piranha
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