Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
foxa1Forkhead box A1. (442 aa)    
Predicted Functional Partners:
LOC108424497
Estrogen receptor; The steroid hormones and their receptors are involved in the regulation of eukaryotic gene expression and affect cellular proliferation and differentiation in target tissues.
    
 0.864
gata3
GATA binding protein 3.
    
 0.860
LOC108443198
Androgen receptor.
   
 0.819
LOC108436713
Uncharacterized protein.
   
 0.819
gata4
GATA binding protein 4.
    
 0.811
gata6
GATA binding protein 6.
    
 0.811
gata2
GATA binding protein 2a.
    
 0.784
LOC108443508
Estrogen receptor 2b.
    
 0.757
LOC108412120
Estrogen receptor 2a.
    
 0.757
mixl1
Mix paired-like homeobox.
   
 
 0.757
Your Current Organism:
Pygocentrus nattereri
NCBI taxonomy Id: 42514
Other names: P. nattereri, Serrasalmus nattereri, red piranha, red-bellied piranha
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