Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
LOC108434330Tripartite motif containing 2a. (747 aa)    
Predicted Functional Partners:
rps27a
Ribosomal protein S27a.
    
  0.735
uba52
Ubiquitin A-52 residue ribosomal protein fusion product 1.
    
  0.733
ubac1
UBA domain containing 1.
    
   0.678
LOC108413226
Leucine rich repeat containing 8 VRAC subunit C.
    
   0.593
hgs
Hepatocyte growth factor-regulated tyrosine kinase substrate.
    
 
 0.574
LOC108429748
FinTRIM family, member 83.
      
 0.519
becn1
Beclin 1, autophagy related.
    
 0.484
ENSPNAP00000021665
ADP-ribosylation factor-like 1; Belongs to the small GTPase superfamily. Arf family.
    
  0.450
GAN
Gigaxonin.
    
 
 0.446
lrsam1
Leucine rich repeat and sterile alpha motif containing 1.
   
  
 0.437
Your Current Organism:
Pygocentrus nattereri
NCBI taxonomy Id: 42514
Other names: P. nattereri, Serrasalmus nattereri, red piranha, red-bellied piranha
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