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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
klhdc4Kelch domain containing 4. (591 aa)    
Predicted Functional Partners:
utp6
UTP6 small subunit processome component.
   
    0.705
cebpz
CCAAT enhancer binding protein zeta.
   
    0.698
ENSPNAP00000016618
RRM domain-containing protein.
   
    0.591
rpf2
Ribosome production factor 2 homolog.
   
    0.558
grwd1
Glutamate-rich WD repeat containing 1.
   
    0.557
bms1
BMS1 ribosome biogenesis factor.
   
    0.534
wdr74
WD repeat domain 74.
   
    0.525
ARMC6
Armadillo repeat containing 6.
      
 0.517
LOC108434686
PWP2 small subunit processome component.
   
    0.509
mak16
Protein MAK16 homolog; Belongs to the MAK16 family.
   
    0.497
Your Current Organism:
Pygocentrus nattereri
NCBI taxonomy Id: 42514
Other names: P. nattereri, Serrasalmus nattereri, red piranha, red-bellied piranha
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.