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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC108441537Si:ch211-149b19.3. (368 aa)    
Predicted Functional Partners:
bckdhb
Branched chain keto acid dehydrogenase E1 subunit beta.
   
 0.900
bckdha
2-oxoisovalerate dehydrogenase subunit alpha; The branched-chain alpha-keto dehydrogenase complex catalyzes the overall conversion of alpha-keto acids to acyl-CoA and CO(2). It contains multiple copies of three enzymatic components: branched-chain alpha-keto acid decarboxylase (E1), lipoamide acyltransferase (E2) and lipoamide dehydrogenase (E3).
   
 0.870
dbt
Dihydrolipoamide acetyltransferase component of pyruvate dehydrogenase complex.
   
 0.826
LOC108411488
Dihydrolipoamide acetyltransferase component of pyruvate dehydrogenase complex.
   
 0.826
dld
Dihydrolipoyl dehydrogenase.
  
 0.644
ENSPNAP00000034707
Pyr_redox_2 domain-containing protein.
  
 0.644
ENSPNAP00000012490
TNF_2 domain-containing protein; Belongs to the tumor necrosis factor family.
    
 0.635
LOC108440232
Arylalkylamine N-acetyltransferase 2.
    
   0.628
aanat
Arylalkylamine N-acetyltransferase 1.
    
   0.628
LOC108425074
UBIQUITIN_CONJUGAT_2 domain-containing protein.
     
 0.623
Your Current Organism:
Pygocentrus nattereri
NCBI taxonomy Id: 42514
Other names: P. nattereri, Serrasalmus nattereri, red piranha, red-bellied piranha
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.