STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC108413992Zgc:158482. (620 aa)    
Predicted Functional Partners:
scp2
Sterol carrier protein 2a; Belongs to the thiolase-like superfamily. Thiolase family.
   
 
 0.909
LOC108440020
Sterol carrier protein 2b.
   
 
 0.909
bbs7
Bardet-Biedl syndrome 7 protein homolog; The BBSome complex is thought to function as a coat complex required for sorting of specific membrane proteins to the primary cilia. The BBSome complex is required for ciliogenesis but is dispensable for centriolar satellite function.
    
 0.893
bbs1
Bardet-Biedl syndrome 1.
   
 0.892
bbs9
Bardet-Biedl syndrome 9.
   
 0.891
ttc8
Tetratricopeptide repeat domain 8.
    
 0.870
bbs4
Bardet-Biedl syndrome 4.
    
 0.870
LOC108415551
Solute carrier family 27 member 2a.
  
  
 
0.776
LOC108414297
AMP-binding domain-containing protein.
  
  
 
0.775
LOC108413994
AMP-binding domain-containing protein.
  
  
 
0.771
Your Current Organism:
Pygocentrus nattereri
NCBI taxonomy Id: 42514
Other names: P. nattereri, Serrasalmus nattereri, red piranha, red-bellied piranha
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