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The next version of STRING is ready for use in your analyses: updated networks across STRING • newly available directed regulatory networks • a new typed view showing functional, physical, and regulatory edges in one network • new clustering options and cluster-based layouts • … and much more!
Explore STRING v12.5 →
STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
pcgf6Polycomb group ring finger 6. (261 aa)    
Predicted Functional Partners:
rnf2
Ring finger protein 2.
    
 0.960
YAF2
YY1 associated factor 2.
    
 0.952
RING1
Ring finger protein 1.
    
 0.947
LOC108439407
YY1 associated factor 2.
    
 0.939
LOC108410973
Si:ch211-195d17.2.
    
 0.909
LOC108413511
L3MBTL histone methyl-lysine binding protein 2.
    
 0.903
skp1
S-phase kinase-associated protein 1; Belongs to the SKP1 family.
    
 0.883
eed
Embryonic ectoderm development.
    
 0.832
LOC108430745
Mbt domain containing 1.
    
 0.831
mbtd1
FCS-type domain-containing protein.
    
 0.831
Your Current Organism:
Pygocentrus nattereri
NCBI taxonomy Id: 42514
Other names: P. nattereri, Serrasalmus nattereri, red piranha, red-bellied piranha
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.