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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
tmppeTransmembrane protein with metallophosphoesterase domain. (432 aa)    
Predicted Functional Partners:
yipf4
Protein YIPF.
      
 0.572
unc50
Unc-50 homolog (C. elegans).
      
 0.562
slc66a3
Solute carrier family 66 member 3.
      
 0.554
LOC108439589
Uncharacterized protein.
      
 0.554
dolpp1
Dolichyldiphosphatase 1.
     
 0.530
yif1a
Yip1 interacting factor homolog A (S. cerevisiae).
      
 0.461
sfxn4
Sideroflexin 4.
      
 0.442
mpdu1
Mannose-P-dolichol utilization defect 1b.
      
 0.433
yipf3
Yip1 domain family, member 3.
    
 
 0.428
tmem41a
Transmembrane protein 41ab.
     
 0.415
Your Current Organism:
Pygocentrus nattereri
NCBI taxonomy Id: 42514
Other names: P. nattereri, Serrasalmus nattereri, red piranha, red-bellied piranha
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.