Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LOC108429290Protein kinase C binding protein 1, like. (1104 aa)    
Predicted Functional Partners:
znf592
Zinc finger protein 592.
   
 
 0.946
ints3
Integrator complex subunit 3.
   
   0.912
ints1
Integrator complex subunit 1.
    
   0.909
ints5
Integrator complex subunit 5.
    
   0.909
LOC108442242
Testis specific protein Y-linked; Belongs to the nucleosome assembly protein (NAP) family.
    
 
 0.896
znf532
Zinc finger protein 532.
   
 
 0.824
LOC108433768
Zinc finger protein 687b.
   
 
 0.810
znf687
Zinc finger protein 687a.
   
 
 0.810
RAP1GDS1
Rap1 GTPase-GDP dissociation stimulator 1.
      
 0.765
LOC108436554
GATA-type domain-containing protein.
   
 
 0.758
Your Current Organism:
Pygocentrus nattereri
NCBI taxonomy Id: 42514
Other names: P. nattereri, Serrasalmus nattereri, red piranha, red-bellied piranha
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