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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC108412521Transporter; Belongs to the sodium:neurotransmitter symporter (SNF) (TC 2.A.22) family. (631 aa)    
Predicted Functional Partners:
terb2
Telomere repeat binding bouquet formation protein 2.
    
 
 0.430
LOC108434798
Syntaxin 3; Belongs to the syntaxin family.
    
 0.414
ENSPNAP00000019393
t-SNARE coiled-coil homology domain-containing protein.
    
 0.414
ENSPNAP00000019410
Uncharacterized protein.
    
 0.414
stx1a
t-SNARE coiled-coil homology domain-containing protein; Belongs to the syntaxin family.
    
 0.414
LOC108441897
Syntaxin 2b.
    
 0.414
LOC108444263
Syntaxin 4; Belongs to the syntaxin family.
    
 0.414
LOC108412774
Syntaxin 1B; Belongs to the syntaxin family.
    
 0.414
LOC108412723
Uncharacterized protein; Belongs to the synuclein family.
    
 
 0.406
Your Current Organism:
Pygocentrus nattereri
NCBI taxonomy Id: 42514
Other names: P. nattereri, Serrasalmus nattereri, red piranha, red-bellied piranha
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