Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
LOC108442604Purine-rich element binding protein Ab. (279 aa)    
Predicted Functional Partners:
PURB
Purine-rich element binding protein Bb.
   
   0.718
LOC108420239
5'-nucleotidase domain containing 3.
      
 0.692
HNRNPA3
Heterogeneous nuclear ribonucleoprotein A3.
    
 
 0.622
adarb2
Adenosine deaminase RNA specific B2 (inactive).
      
 0.618
e2f1
E2F transcription factor 1.
    
 
 0.611
zcrb1
Zinc finger CCHC-type and RNA binding motif 1.
    
   0.609
rfc3
Replication factor C (activator 1) 3.
    
   0.606
cdk5
Cyclin-dependent kinase 5; Belongs to the protein kinase superfamily.
    
 
 0.581
rfc2
Replication factor C (activator 1) 2.
    
   0.566
larp7
La ribonucleoprotein domain family, member 7.
    
   0.557
Your Current Organism:
Pygocentrus nattereri
NCBI taxonomy Id: 42514
Other names: P. nattereri, Serrasalmus nattereri, red piranha, red-bellied piranha
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