Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
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Co-occurrence
Co-expression
Experiments
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[Homology]
Score
LOC108444426Solute carrier family 38 member 8b. (491 aa)    
Predicted Functional Partners:
GAN
Gigaxonin.
      
 0.731
svopl
SVOP-like.
      
 0.699
ENSPNAP00000023478
Biogenesis of lysosomal organelles complex-1, subunit 3.
      
 0.692
lamtor2
Late endosomal/lysosomal adaptor, MAPK and MTOR activator 2.
    
 0.691
LOC108443109
Ras-related GTP binding A.
    
 0.664
lamtor5
Late endosomal/lysosomal adaptor, MAPK and MTOR activator 5.
    
 0.655
lamtor1
Late endosomal/lysosomal adaptor, MAPK and MTOR activator 1.
    
 0.637
lamtor4
Late endosomal/lysosomal adaptor, MAPK and MTOR activator 4.
    
 0.632
slc38a9
Solute carrier family 38 member 9.
      
 0.600
pdss2
Prenyl (decaprenyl) diphosphate synthase, subunit 2; Belongs to the FPP/GGPP synthase family.
      
 0.598
Your Current Organism:
Pygocentrus nattereri
NCBI taxonomy Id: 42514
Other names: P. nattereri, Serrasalmus nattereri, red piranha, red-bellied piranha
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