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The next version of STRING is ready for use in your analyses: updated networks across STRING • newly available directed regulatory networks • a new typed view showing functional, physical, and regulatory edges in one network • new clustering options and cluster-based layouts • … and much more!
Explore STRING v12.5 →
STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC108413195Wolfram syndrome 1a (wolframin). (999 aa)    
Predicted Functional Partners:
atf6
Activating transcription factor 6.
    
 0.863
LOC108438377
Wolfram syndrome 1b (wolframin).
  
  
 
0.840
ENSPNAP00000000797
Uncharacterized protein.
    
 0.761
LOC108410939
BZIP domain-containing protein.
    
 0.761
xbp1
X-box binding protein 1.
     
 0.699
fam20a
FAM20A golgi associated secretory pathway pseudokinase.
     
 0.635
fam20b
FAM20B glycosaminoglycan xylosylkinase.
     
 0.615
LOC108411357
Chloride channel accessory 1.
    
 
 0.579
samd7
Sterile alpha motif domain containing 7.
     
 0.562
stox1
Storkhead box 1.
      
 0.525
Your Current Organism:
Pygocentrus nattereri
NCBI taxonomy Id: 42514
Other names: P. nattereri, Serrasalmus nattereri, red piranha, red-bellied piranha
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