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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC108438745ArfGAP with SH3 domain, ankyrin repeat and PH domain 3. (980 aa)    
Predicted Functional Partners:
ENSPNAP00000002599
Uncharacterized protein.
    
 0.910
ARF6
ADP ribosylation factor 6.
    
 0.910
arfgap2
ADP-ribosylation factor GTPase activating protein 2.
    
0.818
arfgap3
ADP-ribosylation factor GTPase activating protein 3.
    
0.818
LOC108424671
Un-named sa1614.
  
 
 
0.764
LOC108410950
Uncharacterized protein.
  
 
 
0.760
asap2
ArfGAP with SH3 domain, ankyrin repeat and PH domain 2a.
  
 
 
0.759
LOC108437251
ArfGAP with SH3 domain, ankyrin repeat and PH domain 1a.
  
 
 
0.758
LOC108434233
ArfGAP with SH3 domain, ankyrin repeat and PH domain 1b.
  
 
 
0.758
arap2
Uncharacterized protein.
    
0.721
Your Current Organism:
Pygocentrus nattereri
NCBI taxonomy Id: 42514
Other names: P. nattereri, Serrasalmus nattereri, red piranha, red-bellied piranha
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