STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LOC108443734KH domain containing, RNA binding, signal transduction associated 2. (350 aa)    
Predicted Functional Partners:
dhx9
DEAH (Asp-Glu-Ala-His) box helicase 9.
   
 
 0.754
LOC108443858
Heterogeneous nuclear ribonucleoprotein K, like.
   
 
 0.733
hnrnpk
Heterogeneous nuclear ribonucleoprotein K.
   
 
 0.733
LOC108440697
CREB binding protein a.
    
   0.713
LOC108432081
Growth factor receptor-bound protein 2b.
    
   0.693
LOC108441871
Growth factor receptor-bound protein 2a.
    
   0.693
LOC108435232
Tyrosine-protein kinase.
    
 0.679
LOC108435233
Tyrosine-protein kinase.
    
 0.679
LOC108412503
Tyrosine-protein kinase.
    
 0.679
LOC108443411
Tyrosine-protein kinase.
    
 0.679
Your Current Organism:
Pygocentrus nattereri
NCBI taxonomy Id: 42514
Other names: P. nattereri, Serrasalmus nattereri, red piranha, red-bellied piranha
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.