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The next version of STRING is ready for use in your analyses: updated networks across STRING newly available directed regulatory networks a new typed view showing functional, physical, and regulatory edges in one network new clustering options and cluster-based layouts … and much more!
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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
macrod1Mono-ADP ribosylhydrolase 1. (379 aa)    
Predicted Functional Partners:
akt1s1
AKT1 substrate 1 (proline-rich).
   
    0.705
parp1
Poly [ADP-ribose] polymerase.
    
 
 0.589
adprhl2
ADP-ribosylhydrolase like 2.
      
 0.562
ENSPNAP00000032775
Zgc:165656.
    
 
 0.452
aifm1
Apoptosis inducing factor mitochondrion associated 1.
  
 0.432
parp2
Poly [ADP-ribose] polymerase.
    
 
 0.411
LOC108442911
Poly (ADP-ribose) glycohydrolase a.
      
 0.408
parp3
Poly [ADP-ribose] polymerase.
    
 
 0.400
Your Current Organism:
Pygocentrus nattereri
NCBI taxonomy Id: 42514
Other names: P. nattereri, Serrasalmus nattereri, red piranha, red-bellied piranha
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