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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSPNAP00000002168Uncharacterized protein. (3138 aa)    
Predicted Functional Partners:
fau
40S ribosomal protein S30; Belongs to the eukaryotic ribosomal protein eS30 family.
   
  0.790
LOC108411505
40S ribosomal protein S30; Belongs to the eukaryotic ribosomal protein eS30 family.
   
  0.790
gle1
GLE1 RNA export mediator.
    
 0.623
frem1
Fras1 related extracellular matrix 1a.
    
 0.571
LOC108429520
Fras1 related extracellular matrix 1b.
    
 0.571
ENSPNAP00000023394
40S ribosomal protein S24; Belongs to the eukaryotic ribosomal protein eS24 family.
   
 
 0.562
fras1
Fraser extracellular matrix complex subunit 1.
    
 0.560
rps28
Ribosomal protein S28.
   
   0.558
ENSPNAP00000005258
Ribosomal protein S15; Belongs to the universal ribosomal protein uS19 family.
   
   0.557
rps11
Ribosomal protein S11; Belongs to the universal ribosomal protein uS17 family.
   
 
 0.541
Your Current Organism:
Pygocentrus nattereri
NCBI taxonomy Id: 42514
Other names: P. nattereri, Serrasalmus nattereri, red piranha, red-bellied piranha
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