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The next version of STRING is ready for use in your analyses: updated networks across STRING • newly available directed regulatory networks • a new typed view showing functional, physical, and regulatory edges in one network • new clustering options and cluster-based layouts • … and much more!
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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
eappE2f-associated phosphoprotein. (304 aa)    
Predicted Functional Partners:
aar2
AAR2 splicing factor.
    
 
 0.880
prpf8
Pre-mRNA processing factor 8.
    
 
 0.864
eftud2
Elongation factor Tu GTP binding domain containing 2.
    
 
 0.815
snrnp200
Small nuclear ribonucleoprotein 200 (U5).
    
 
 0.814
tssc4
Tumor suppressing subtransferable candidate 4.
    
 
 0.806
gpatch1
G patch domain containing 1.
    
   0.771
dhx35
DEAH-box helicase 35.
    
   0.765
cd2bp2
CD2 (cytoplasmic tail) binding protein 2.
    
 
 0.763
ecd
Ecdysoneless homolog (Drosophila).
    
   0.729
ddx23
DEAD (Asp-Glu-Ala-Asp) box polypeptide 23; Belongs to the DEAD box helicase family.
    
 
 0.722
Your Current Organism:
Pygocentrus nattereri
NCBI taxonomy Id: 42514
Other names: P. nattereri, Serrasalmus nattereri, red piranha, red-bellied piranha
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