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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
fopnlFgfr1op N-terminal like. (163 aa)    
Predicted Functional Partners:
LOC108431508
ISY1 splicing factor homolog.
    
   0.950
gsc
Goosecoid.
    
   0.888
LOC108425807
Dharma.
    
   0.888
catip
Ciliogenesis associated TTC17 interacting protein.
   
    0.737
ofd1
OFD1 centriole and centriolar satellite protein.
    
 
 0.729
nenf
Neudesin neurotrophic factor; Belongs to the cytochrome b5 family.
   
    0.695
acp1
LMWPc domain-containing protein.
   
    0.695
pibf1
Progesterone immunomodulatory binding factor 1.
    
 
 0.659
kiaa0753
Si:dkey-243i1.1.
    
 
 0.653
bmerb1
BMERB domain containing 1.
      
 0.646
Your Current Organism:
Pygocentrus nattereri
NCBI taxonomy Id: 42514
Other names: P. nattereri, Serrasalmus nattereri, red piranha, red-bellied piranha
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