Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LOC108434295Ig-like domain-containing protein; Belongs to the MHC class I family. (354 aa)    
Predicted Functional Partners:
ENSPNAP00000018307
Uncharacterized protein.
    
  0.615
ENSPNAP00000018406
Ig-like domain-containing protein.
    
  0.615
LOC108426389
Beta-2-microglobulin; Component of the class I major histocompatibility complex (MHC). Involved in the presentation of peptide antigens to the immune system.
   
  0.610
rpa2
Replication protein A2.
   
  0.610
LOC108441742
RPA_C domain-containing protein.
   
  0.610
LOC108426686
Beta-2-microglobulin; Component of the class I major histocompatibility complex (MHC). Involved in the presentation of peptide antigens to the immune system.
   
  0.610
LOC108425050
Calreticulin.
     
  0.505
calr3
Calreticulin.
     
  0.505
LOC108427098
Calreticulin 3b.
     
  0.505
LOC108436869
Cd8 beta.
     
  0.467
Your Current Organism:
Pygocentrus nattereri
NCBI taxonomy Id: 42514
Other names: P. nattereri, Serrasalmus nattereri, red piranha, red-bellied piranha
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