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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
tdrkhTudor and KH domain containing. (896 aa)    
Predicted Functional Partners:
piwil1
Piwi-like RNA-mediated gene silencing 1; Belongs to the argonaute family.
   
 0.903
piwil2
Piwi-like RNA-mediated gene silencing 2; Belongs to the argonaute family.
   
 0.895
tdrd9
Tudor domain containing 9.
    
0.754
snd1
Staphylococcal nuclease domain-containing protein; Endonuclease that mediates miRNA decay of both protein-free and AGO2-loaded miRNAs.
   
 0.701
vwa2
Tudor domain containing 1.
   
0.680
asz1
Ankyrin repeat, SAM and basic leucine zipper domain containing 1.
   
 
 0.675
fkbp6
Peptidylprolyl isomerase.
     
 0.672
LOC108411205
Protein kinase, cAMP-dependent, catalytic, beta b; Belongs to the protein kinase superfamily.
    
 0.664
LOC108429687
Protein kinase, cAMP-dependent, catalytic, alpha, genome duplicate a; Belongs to the protein kinase superfamily.
    
 0.664
THAP1
THAP domain containing 1.
    
 0.664
Your Current Organism:
Pygocentrus nattereri
NCBI taxonomy Id: 42514
Other names: P. nattereri, Serrasalmus nattereri, red piranha, red-bellied piranha
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