msrb3 protein (Pygocentrus nattereri) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

msrb3

Peptide-methionine (R)-S-oxide reductase; Methionine-sulfoxide reductase that specifically reduces methionine (R)-sulfoxide back to methionine. While in many cases methionine oxidation is the result of random oxidation following oxidative stress, methionine oxidation is also a post-translational modification that takes place on specific residues. (247 aa)

Predicted Functional Partners:

LOC108438747

0.831

LOC108429338

0.822

TXN

0.732

LOC108444223

0.732

mrpl20

0.724

LOC108423915

0.688

ENSPNAP00000017850

0.635

ENSPNAP00000027664

0.635

cat

0.630

mrpl33

0.609

Your Current Organism:

Pygocentrus nattereri

NCBI taxonomy Id: 42514
Other names: P. nattereri, Serrasalmus nattereri, red piranha, red-bellied piranha

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSPNAP00000017850	LOC108423915	ENSPNAP00000017850	ENSPNAP00000029043	Thioredoxin domain-containing protein.	NME/NM23 family member 8; Belongs to the NDK family.	0.418
ENSPNAP00000017850	LOC108429338	ENSPNAP00000017850	ENSPNAP00000023340	Thioredoxin domain-containing protein.	Methionine sulfoxide reductase A.	0.869
ENSPNAP00000017850	LOC108438747	ENSPNAP00000017850	ENSPNAP00000024078	Thioredoxin domain-containing protein.	Si:ch1073-358c10.1.	0.869
ENSPNAP00000017850	msrb3	ENSPNAP00000017850	ENSPNAP00000002440	Thioredoxin domain-containing protein.	Peptide-methionine (R)-S-oxide reductase; Methionine-sulfoxide reductase that specifically reduces methionine (R)-sulfoxide back to methionine. While in many cases methionine oxidation is the result of random oxidation following oxidative stress, methionine oxidation is also a post-translational modification that takes place on specific residues.	0.635
ENSPNAP00000027664	LOC108423915	ENSPNAP00000027664	ENSPNAP00000029043	Vps53_N domain-containing protein.	NME/NM23 family member 8; Belongs to the NDK family.	0.418
ENSPNAP00000027664	LOC108429338	ENSPNAP00000027664	ENSPNAP00000023340	Vps53_N domain-containing protein.	Methionine sulfoxide reductase A.	0.869
ENSPNAP00000027664	LOC108438747	ENSPNAP00000027664	ENSPNAP00000024078	Vps53_N domain-containing protein.	Si:ch1073-358c10.1.	0.869
ENSPNAP00000027664	msrb3	ENSPNAP00000027664	ENSPNAP00000002440	Vps53_N domain-containing protein.	Peptide-methionine (R)-S-oxide reductase; Methionine-sulfoxide reductase that specifically reduces methionine (R)-sulfoxide back to methionine. While in many cases methionine oxidation is the result of random oxidation following oxidative stress, methionine oxidation is also a post-translational modification that takes place on specific residues.	0.635
LOC108423915	ENSPNAP00000017850	ENSPNAP00000029043	ENSPNAP00000017850	NME/NM23 family member 8; Belongs to the NDK family.	Thioredoxin domain-containing protein.	0.418
LOC108423915	ENSPNAP00000027664	ENSPNAP00000029043	ENSPNAP00000027664	NME/NM23 family member 8; Belongs to the NDK family.	Vps53_N domain-containing protein.	0.418
LOC108423915	LOC108429338	ENSPNAP00000029043	ENSPNAP00000023340	NME/NM23 family member 8; Belongs to the NDK family.	Methionine sulfoxide reductase A.	0.923
LOC108423915	LOC108438747	ENSPNAP00000029043	ENSPNAP00000024078	NME/NM23 family member 8; Belongs to the NDK family.	Si:ch1073-358c10.1.	0.923
LOC108423915	LOC108444223	ENSPNAP00000029043	ENSPNAP00000029262	NME/NM23 family member 8; Belongs to the NDK family.	Thioredoxin; Belongs to the thioredoxin family.	0.508
LOC108423915	TXN	ENSPNAP00000029043	ENSPNAP00000015308	NME/NM23 family member 8; Belongs to the NDK family.	Thioredoxin; Belongs to the thioredoxin family.	0.508
LOC108423915	cat	ENSPNAP00000029043	ENSPNAP00000022028	NME/NM23 family member 8; Belongs to the NDK family.	Catalase; Occurs in almost all aerobically respiring organisms and serves to protect cells from the toxic effects of hydrogen peroxide.	0.742
LOC108423915	mrpl20	ENSPNAP00000029043	ENSPNAP00000011060	NME/NM23 family member 8; Belongs to the NDK family.	Mitochondrial ribosomal protein L20; Belongs to the bacterial ribosomal protein bL20 family.	0.767
LOC108423915	mrpl33	ENSPNAP00000029043	ENSPNAP00000026153	NME/NM23 family member 8; Belongs to the NDK family.	Mitochondrial ribosomal protein L33.	0.723
LOC108423915	msrb3	ENSPNAP00000029043	ENSPNAP00000002440	NME/NM23 family member 8; Belongs to the NDK family.	Peptide-methionine (R)-S-oxide reductase; Methionine-sulfoxide reductase that specifically reduces methionine (R)-sulfoxide back to methionine. While in many cases methionine oxidation is the result of random oxidation following oxidative stress, methionine oxidation is also a post-translational modification that takes place on specific residues.	0.688
LOC108429338	ENSPNAP00000017850	ENSPNAP00000023340	ENSPNAP00000017850	Methionine sulfoxide reductase A.	Thioredoxin domain-containing protein.	0.869
LOC108429338	ENSPNAP00000027664	ENSPNAP00000023340	ENSPNAP00000027664	Methionine sulfoxide reductase A.	Vps53_N domain-containing protein.	0.869

page 1 of 4

Server load: low (32%) [HD]

Permalink

Network

Neighborhood

Experiments

Cooccurrence

Databases

Coexpression

Textmining

Fusion

© STRING Consortium 2025

Credits

Access

Info

About