Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
snap29Synaptosome associated protein 29. (264 aa)    
Predicted Functional Partners:
vamp8
Vesicle-associated membrane protein 8 (endobrevin).
   
 0.999
vamp7
Synaptobrevin-like 1; Belongs to the synaptobrevin family.
    
 0.999
ENSPNAP00000035679
Uncharacterized protein.
    
 0.999
vamp4
Uncharacterized protein.
   
 0.997
tsnare1
Si:ch211-208k15.1; Belongs to the syntaxin family.
    
 0.995
LOC108440734
Si:ch73-234b20.5.
   
 0.992
stx7
Syntaxin 7-like; Belongs to the syntaxin family.
    
 0.992
LOC108441080
YKT6 v-SNARE homolog (S. cerevisiae); Belongs to the synaptobrevin family.
    
 0.992
ENSPNAP00000035664
t-SNARE coiled-coil homology domain-containing protein; Belongs to the syntaxin family.
    
 0.992
stx12
Syntaxin 12, like; Belongs to the syntaxin family.
    
 0.991
Your Current Organism:
Pygocentrus nattereri
NCBI taxonomy Id: 42514
Other names: P. nattereri, Serrasalmus nattereri, red piranha, red-bellied piranha
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