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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC108434255ISG15 ubiquitin like modifier. (83 aa)    
Predicted Functional Partners:
mysm1
Myb-like, SWIRM and MPN domains 1.
    
 0.995
ubxn7
UBX domain protein 7.
    
 0.993
LOC108425074
UBIQUITIN_CONJUGAT_2 domain-containing protein.
   
 0.968
LOC108424613
Ubiquitin-conjugating enzyme E2 variant 1.
   
 0.968
trip12
Thyroid hormone receptor interactor 12.
   
 0.959
LOC108437991
NBR1 autophagy cargo receptor b.
   
 0.947
LOC108413416
NBR1 autophagy cargo receptor a.
   
 0.947
traf7
TNF receptor-associated factor 7.
    
 0.941
ENSPNAP00000023394
40S ribosomal protein S24; Belongs to the eukaryotic ribosomal protein eS24 family.
   
 0.931
rps3a
40S ribosomal protein S3a; Belongs to the eukaryotic ribosomal protein eS1 family.
   
 0.925
Your Current Organism:
Pygocentrus nattereri
NCBI taxonomy Id: 42514
Other names: P. nattereri, Serrasalmus nattereri, red piranha, red-bellied piranha
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