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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC108432049Zgc:100868; Belongs to the peptidase S1 family. (593 aa)    
Predicted Functional Partners:
LOC108424117
Macrophage stimulating 1 receptor a.
    
  0.726
ENSPNAP00000006549
Uncharacterized protein.
    
  0.726
met
MET proto-oncogene, receptor tyrosine kinase.
    
  0.726
mst1r
Macrophage stimulating 1 receptor b.
    
  0.726
ENSPNAP00000035463
Uncharacterized protein.
    
  0.726
LOC108411303
Tissue factor pathway inhibitor.
    
 0.605
LOC108412904
Uncharacterized protein.
    
  0.585
wdr90
WD repeat domain 90.
    
 0.550
LOC108425825
Serine peptidase inhibitor, Kunitz type, 2.
    
 0.537
ambp
Alpha-1-microglobulin/bikunin precursor.
   
 0.504
Your Current Organism:
Pygocentrus nattereri
NCBI taxonomy Id: 42514
Other names: P. nattereri, Serrasalmus nattereri, red piranha, red-bellied piranha
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.