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The next version of STRING is ready for use in your analyses: updated networks across STRING • newly available directed regulatory networks • a new typed view showing functional, physical, and regulatory edges in one network • new clustering options and cluster-based layouts • … and much more!
Explore STRING v12.5 →
STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
gbx2Gastrulation brain homeobox 2. (345 aa)    
Predicted Functional Partners:
anapc1
Anaphase promoting complex subunit 1.
      
 0.643
LOC108442712
Fibroblast growth factor; Belongs to the heparin-binding growth factors family.
   
  
 0.634
wnt1
Protein Wnt; Ligand for members of the frizzled family of seven transmembrane receptors; Belongs to the Wnt family.
    
 
 0.627
nek2
NIMA-related kinase 2.
      
 0.619
LOC108440332
Opsin 1 (cone pigments), short-wave-sensitive 2.
      
 0.479
tal2
T-cell acute lymphocytic leukemia 2.
    
 
 0.450
pbx3
Homeobox domain-containing protein.
    
 0.445
LOC108438878
Pre-B-cell leukemia homeobox 1a.
    
 0.445
LOC108439298
Pre-B-cell leukemia homeobox 2.
    
 0.445
LOC108443834
Homeobox domain-containing protein.
    
 0.445
Your Current Organism:
Pygocentrus nattereri
NCBI taxonomy Id: 42514
Other names: P. nattereri, Serrasalmus nattereri, red piranha, red-bellied piranha
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