Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
arafA-Raf proto-oncogene, serine/threonine kinase. (608 aa)    
Predicted Functional Partners:
nras
NRAS proto-oncogene, GTPase.
    
 0.984
LOC108442468
HRas proto-oncogene, GTPase a.
    
 0.974
LOC108430106
Mitogen-activated protein kinase kinase 2a; Belongs to the protein kinase superfamily.
   
 0.974
LOC108442651
HRas proto-oncogene, GTPase b.
    
 0.973
LOC108428819
V-Ki-ras2 Kirsten rat sarcoma viral oncogene homolog.
    
 0.973
rras
RAS related.
    
 0.971
map2k1
Mitogen-activated protein kinase kinase 1; Belongs to the protein kinase superfamily.
   
 0.970
LOC108413997
Zgc:55558.
    
 0.970
rras2
RAS related 2.
    
 0.970
LOC108427153
Mitogen-activated protein kinase kinase 2b; Belongs to the protein kinase superfamily.
   
 0.970
Your Current Organism:
Pygocentrus nattereri
NCBI taxonomy Id: 42514
Other names: P. nattereri, Serrasalmus nattereri, red piranha, red-bellied piranha
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