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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
slc46a1Solute carrier family 46 member 1. (476 aa)    
Predicted Functional Partners:
cel
Carboxylic ester hydrolase; Belongs to the type-B carboxylesterase/lipase family.
   
    0.727
slc19a1
Solute carrier family 19 member 1.
      
 0.601
dhfr
Dihydrofolate reductase.
      
 0.595
mthfd1l
Methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 1 like.
      
 0.592
pde3b
Phosphodiesterase.
      
 0.554
LOC108411362
Folate receptor.
      
 0.505
LOC108442199
C1q and TNF related 9.
    
   0.487
mfsd10
Major facilitator superfamily domain containing 10.
      
 0.481
mfsd9
Major facilitator superfamily domain containing 9.
      
 0.475
mthfd1
Methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 1b.
      
 0.442
Your Current Organism:
Pygocentrus nattereri
NCBI taxonomy Id: 42514
Other names: P. nattereri, Serrasalmus nattereri, red piranha, red-bellied piranha
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