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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
cpvlCarboxypeptidase vitellogenic like; Belongs to the peptidase S10 family. (478 aa)    
Predicted Functional Partners:
LOC108442600
Cathepsin F; Belongs to the peptidase C1 family.
   
 0.801
LOC108411932
Neuraminidase 1.
   
 0.623
LOC108411940
Neuraminidase 1.
   
 0.623
LOC108443046
Beta-galactosidase.
   
 0.614
LOC108433266
Beta-1,3-glucuronyltransferase 1 (glucuronosyltransferase P) b; Belongs to the glycosyl hydrolase 35 family.
   
 0.614
bod1l1
Uncharacterized protein.
   
 0.593
ENSPNAP00000020884
Biorientation of chromosomes in cell division 1.
   
 0.593
glb1
Beta-galactosidase.
   
 0.593
LOC108415500
Galactosidase, beta 1-like.
   
 0.593
ENSPNAP00000033773
Uncharacterized protein.
   
 0.593
Your Current Organism:
Pygocentrus nattereri
NCBI taxonomy Id: 42514
Other names: P. nattereri, Serrasalmus nattereri, red piranha, red-bellied piranha
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.