close STRING v12.5 is now available!
The next version of STRING is ready for use in your analyses: updated networks across STRING • newly available directed regulatory networks • a new typed view showing functional, physical, and regulatory edges in one network • new clustering options and cluster-based layouts • … and much more!
Explore STRING v12.5 →
STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
nefmNeurofilament, medium polypeptide a; Belongs to the intermediate filament family. (849 aa)    
Predicted Functional Partners:
LOC108441168
Histidine rich calcium binding protein.
   
 0.707
prph
Peripherin; Belongs to the intermediate filament family.
    
 
0.699
LOC108436147
Un-named hu7910.
     
 0.676
grin1
Glutamate receptor, ionotropic, N-methyl D-aspartate 1b.
   
 0.650
LOC108435476
Glutamate receptor, ionotropic, N-methyl D-aspartate 1a.
   
 0.650
LOC108432484
Aspartate beta-hydroxylase.
   
 
 0.616
LOC108412904
Uncharacterized protein.
    
  0.605
arid4b
Translocase of outer mitochondrial membrane 20.
    
 0.545
arid4a
AT rich interactive domain 4A (RBP1-like).
    
 0.545
slf1
SMC5-SMC6 complex localization factor 1.
   
 0.521
Your Current Organism:
Pygocentrus nattereri
NCBI taxonomy Id: 42514
Other names: P. nattereri, Serrasalmus nattereri, red piranha, red-bellied piranha
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.