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The next version of STRING is ready for use in your analyses: updated networks across STRING • newly available directed regulatory networks • a new typed view showing functional, physical, and regulatory edges in one network • new clustering options and cluster-based layouts • … and much more!
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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
mfsd3Major facilitator superfamily domain containing 3. (441 aa)    
Predicted Functional Partners:
LOC108424184
Malate synthase-like.
  
 0.907
ak9
Adenylate kinase 9.
      
 0.594
mfsd5
Major facilitator superfamily domain containing 5.
      
 0.545
tk1
Thymidine kinase.
     
 0.528
mfsd13a
Major facilitator superfamily domain containing 13A.
      
 0.527
mfsd11
Major facilitator superfamily domain containing 11.
      
 0.516
cstf3
Cleavage stimulation factor, 3' pre-RNA, subunit 3.
    
 0.511
tyms
Thymidylate synthetase.
    
  0.505
gapdh
Glyceraldehyde-3-phosphate dehydrogenase.
   
 0.497
gapdhs
Glyceraldehyde-3-phosphate dehydrogenase.
   
 0.497
Your Current Organism:
Pygocentrus nattereri
NCBI taxonomy Id: 42514
Other names: P. nattereri, Serrasalmus nattereri, red piranha, red-bellied piranha
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.