Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSPNAP00000002860Ig-like domain-containing protein. (236 aa)    
Predicted Functional Partners:
fancm
Uncharacterized protein.
    
 0.591
mus81
MUS81 structure-specific endonuclease subunit.
    
 0.564
pold2
Polymerase (DNA directed), delta 2, regulatory subunit.
    
 0.546
ddx20
DEAD (Asp-Glu-Ala-Asp) box polypeptide 20; Belongs to the DEAD box helicase family.
    
 0.542
LOC108429871
Ig-like domain-containing protein.
   
 0.532
pold1
DNA polymerase.
    
 0.526
LOC108426214
Survival of motor neuron 1, telomeric.
    
 0.504
snrpe
Small nuclear ribonucleoprotein E; Associated with the spliceosome snRNP U1, U2, U4/U6 and U5. Belongs to the snRNP Sm proteins family.
   
 0.484
NDUFA13
NADH:ubiquinone oxidoreductase subunit A13.
    
  0.479
DNA2
DNA replication helicase/nuclease 2.
    
 0.475
Your Current Organism:
Pygocentrus nattereri
NCBI taxonomy Id: 42514
Other names: P. nattereri, Serrasalmus nattereri, red piranha, red-bellied piranha
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